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UPDATE: Results of my GI-MAP Gut Test

This update is a long time coming. I meant to follow up with my gut test many months ago but life got crazy and I got side tracked. Turns out I’m not the best client….


If you want to read my detailed article about what was going on with me and my health back in March 2016, read this post.


To give you a quick summary, I had been struggling on and off with my digestive health for pretty much my whole life. In the past I had run numerous stool tests on myself. My first ones did indicate a parasite and bacterial infection but I was able to easily remove those with the use of herbs and botanicals.


Despite getting rid of those infections, I still wasn’t feeling my best. I wasn’t having any significant digestive symptoms but things definitely felt off.


The stool culture tests I was running weren’t bringing up anything. Early last year, the Functional Nutrition organization I work for started carrying a new type of pathogen test. Rather that searching for pathogens through a microscope, this new test uses a FDA approved technology called Polymerase Chain Reaction. This involves a technique that identifies DNA in stool. It can highlight DNA of any critter that might be living inside you. It is significantly more sensitive than a regular stool culture test.


I decided to run this panel on myself and what I found was shocking. See my results below.






As it turned out my results indicated some very serious infections. The most serious was Entamoeba Histolytica. This parasite is pretty much the worst you can get. You typically get it from travelling in Central American, South American and Asia (I have been to all these places). The reason this parasite is so dangerous is because in some cases it can be fatal. It doesn’t like to stay in the gastrointestinal tract. It can migrate to the liver, the brain and the lungs. In the liver it can cause an absess and this is what can be fatal.


The second scary infection I had was Clostridium Difficile (C. Diff). This is nasty strain of bacteria that is resistant to many types of antibiotics. It produces significant toxins and is responsible for thousands of deaths per year, mostly in the senior population.


I also had Giardia (a water born parasite), Klebsiella (a opportunistic bacterial infection that can trigger autoimmunity) and Proteus (another autoimmune triggering bacteria).


The test was a total mess. Since then I have run close to fifty of these tests on clients and my results are still the worst I have seen to date.


How Did I Heal?


I first did 3 weeks on an antibiotic called Iodoquinol. That was the most intense part of the protocol. I was really upset to be taking antibiotics but unfortunately the E.Histolytica does not respond well to herbal treatment. The antibiotic also was indicated for the Giardia infection.


I then spent 2 months taking Saccromyces Boulliardi, a beneficial strain of yeast that crowds out the C.diff.


Once I was done this, I spent the next two months on three products from Bio-Botanical Research; Biocidin, Biotonic and Olivirex. Together these three products are a force. They kill infections, disrupt biofilm, boost detoxification and stimulate the immune system.


I felt significantly better over the summer. My energy improved, as did my stamina. My skin started to glow and I felt like I was heading in the right direction.


Unfortunately in September I went to a potluck and accidentally ate a dip that I thought was gluten free (it wasn’t). I didn’t figure this out until months later but I spent 8 weeks with intense stomach pain, skin breakouts and wondering what the hell was going on.


This is what kicked my butt into gear and made me realize I needed to make re-testing a priority. Normally, I have clients re-test within 3-6 months depending on the protocol. It’s very important to re-test and confirm that infections are gone and another round of treatment is not needed.


Below are the results of my re-test.






As you can see things are significantly improved. I was very happy to see these results. All the infections are gone except the Klebsiella. This bacteria is very opportunistic and produces a significant amount of biofilm (a sticky substance that bacteria can “hide” under). Clearly this infection has been resistant to my efforts and I am going to have to make a new plan.


A little bit of Candida also showed up on this test which was not on my previous test. This is not unusual. It is not uncommon for new things to pop up on a re-test. Once you get rid of certain infections, they make room for other things to move in.


I am not overly concerned with low amounts of Candida. It should respond well to some anti-fungal herbs and a low sugar diet.


The next biggest issue with my re-test is my elevated Anti-Gliadin SigA. Gliadin is the component in gluten that people react to. This elevated marker confirms my gluten exposure at that potluck in September. After exposure antibodies stay elevated for up to 6 months and can cause significant inflammation. I really need to be more careful at potlucks and inquire about ingredients.


Everything else is looking a lot better. My friendly flora levels have improved. My Bifidobacterium has gone up. This is important as low levels of Bifido. are related to C.diff infections. My enterococcus and lactobacillus bacteria could  be a little higher so probiotics will be on the menu.


These results are very encouraging to me. They give me hope and motivation to continue on this path.


In the coming weeks I will also be posting results of my DUTCH urine hormone panel and Organic Acids Tests. Stay tuned!


If you are interested in speaking with me about the GI-MAP test I ran to clean up my gut, please feel free to schedule a Free 30 minute call with me. If you have been struggling with digestive issues that seem to persist no matter what you do, you should consider my comprehensive gut healing program. In this program, we will run three important labs to identify gut dysfunction and use these to customize a protocol specifically for your gut.


You can schedule a free appointment with me here.




  • Michelle
    January 7, 2017 at 3:59 pm

    Hi Kendra, just curious as to why/how you got the infections? I understand the gluten reaction, but what about the others? You live such a healthy lifestyle! The C-Diff? Also did you take a probiotic and which one? Thanks!

  • Tara
    June 12, 2017 at 7:14 pm

    If one tests positive to, say, cdiff – do they have to worry about their spouse and children also having the same infection?

  • susanne
    June 13, 2017 at 5:42 am

    can c-diff be low grade & chronic? I just sent this G.I. map test off to the lab this a.m. and am hoping for some answers!

  • Sid Deb
    July 3, 2017 at 10:45 pm

    I have been ill for some years and last 2 years gotten worse. I have done a SIBO breath test, I have a H2 positive SIBO result, normal methane. Also worrying GI-map results, c.difficile, salmonella, low elastase-1; high Steatocrit; low secretory IgA; high Anti-gliadin IgA; high b-Glucuronidase. Some of the normal bacteria are high too, Bacteroides fragillis, Enterococcus spp. , Escherichia spp., I assumed with the last 3 that is a good thing? Thing is, what do I do now? I live in London, I want to find a nutritionist like you that knows about this stuff. I have also travelled a lot and back in 2000 I got very ill in India and it was a parasite called Dientamoeba fragilis, it took me 2 years & a v low carb diet to get well, but have never fully recovered my digestion since even though the parasite was not found this time.

  • Jackie Bott
    September 2, 2017 at 2:26 am

    Hi Kendra

    I just had my two kiddos do the GI-Map – one of them had pretty high Candida and the other had a whole array of stuff, poor girl and she’s only 9 (H-Pylori with positive vacA virulence factor, salmonella, giardia, blastocystis hominis, streptoccocus, Dientamoeba fragilis, high Sig A and high anti-gliaden IgA). We did herbal protocols and both kiddos did well. My son got rid of his candida and my daughter got rid of everything except Dientamoeba fragilis so we will do another round with her. They were both on gf diets for 2.5 months before the test. However, both developed overgrowths of the normal bacteria and both of their anti-gliaden IgA’s were through the roof. Before my sons was 92 and afterwards it was 792! My daugther went from 134 which I thought was high to 491. My functional medicine practitioner said she thought they might be due to cross reactions from other foods that perhaps had been used instead of the gluten. I really don’t understand how it can go so high after being GF for a while and yet before when they were eating gluten the values were much lower. Perhaps it is better to eat gluten then rather than the GF foods that perhaps are causing more of a problem. Do you have any thoughts on these results?



      • Jackie Bott
        September 5, 2017 at 2:10 am

        HI Kendra

        Thanks so much for getting back to me! The range of the fecal IgA test was 0-100 U/L on the initial tests and 0-100 or 0-157 on the retests. We have just started on the healing journey for my kiddos but I have done more analysis for myself which I did first. My FMP has suggested more tests for both kiddos and another round of parasite protocol for my daughter and added probiotics for my son to help balance the gut – she thinks he could have SIBO and is suggesting he could do a Cyrex Cross Reactive foods panel to see if other foods are affecting the IgAs. My daughter still has a lot of bloating (which is one of the biggest symptoms which got me started on this process) so thinking there is still a big imbalance in her gut bacteria still. She is not happy about having to go GF forever but we are working on it and I’m wondering if she may have to be casein free too which would be very hard for her. Thanks for the advice about heavy metals and mineral imbalance. I also had a lot of pathogens in my gut too, but found out that I am a non-secretor and so do not secrete antibodies into my bodily fluids and so my gut is more susceptible to pathogens and I will just have to deal with that. I went through lots of protocols to get rid of the pathogens and then after removing most of them, my last GI map I ended up showing me being reinfected again with some of them – so perhaps the heavy metals could be a problem. I am doing a detox protocol right now and did not have significant mercury problem (had all my dental amalgams removed over a year ago) but don’t know about other heavy metals – what are the key ones to look out for?

  • Alex Au
    October 6, 2017 at 9:49 am

    Dear Kendra,

    I was diagnosed with hydrogen-dominant SIBO back in March, even though I was experiencing constipation along with bloating and gas. After 2 courses of antibiotics (Metronidazole + Levofloxacin, followed by Rifaxamin), a 2nd Lactulose breath test showed that SIBO was gone. However, I was still suffering from the same symptoms. A GI MAP stool analysis showed dysbiosis in the colon, which were Proteus spp. and Morganella spp. After being on herbal antimicrobials for 2 months (Oil of oregano, Berberine, Garlic Plus), I suddenly started to suffer from cramping, diarrhea, and foul gas. I was told that a Urine Th1/Th2 Balance Test Kit (UBT) from PROTEA Biopharma could diagnose the presence of H2S-producing bacteria. I did the test, and it was positive. Do you think that I have H2S SIBO, or that the H2S-producing bacteria is localized more in the colon?


      • Alex Au
        October 7, 2017 at 9:39 am

        Dear Kendra,

        Thank you for your reply. I have done an organic acids test, but my results are not here yet. Would you recommend running a minerals/metals panel and then undergoing some kind of detoxification protocol? Or supplementation with probiotics to rebalance the gut flora? I am taking Saccharomyces Boulardii, but it does not seem to be doing anything.

        Thank you very much,

          • Alex Au
            October 10, 2017 at 5:45 pm

            Dear Kendra,

            Thank you very much for your insights. I will definitely look into running a mineral and metals panel with my consultant. I just wanted to let you know that after taking a course of Clarityn (anti-histamine), the diarrhea has actually stopped. So perhaps it had to do with histamine overload from the overgrown bacteria?

            Thanks you very much,

      • Jason
        October 12, 2017 at 1:49 am

        Curious, did your functional training actually teach you that pathogens protect people from Metals, or did you just pick this rumour up off the internet somewhere, like from Klinghart followers, or? AFAIK, and I do a lot of research, there is ZERO proof of this claim, other than maybe one in vitro petro dish study, which is worthless logically of course. What happens is the Metals damage the immune system and disrupt many bodily process’s, and this lets the pathogens thrive.

          • Jason
            October 14, 2017 at 12:16 am

            Hi Kendra thanks for the reply. That is interesting, because again AFAIK, there are NO studies that prove, that pathogens , PROTECT people from anything, and in contrast, there are hundreds and thousands that show how bad they are, there is NO benefit to pathogens (Candida alone emits 80+ VERY nasty toxins, our body is not promoting THAT on purpose I mean just think about it…. 🙂 ), and I truly believe they do NOT protect us in any way, including from metals (Mercury is death, the absence of life, nothing and I mean nothing is going to live in unison with it). This is just a rumour that Klinghart started many many years ago, because of the fairly consistent relationship they have, where it seems where one is, so is the other, but that sure does not mean one is protecting us from the other! I really can’t believe the Functional model is teaching this, I will have to check my notes on this and try and figure out where the heck they found any viability for this.

            Also, in the many 100’s of people I have seen, and in myself, I have KILLED off the pathogens numerous times, more than I can count/remember, only to my BENEFIT each time!!!! (And I am still very very toxic as were the others). If they were protecting me I would be worse off, never the case, when someone knows what they are doing you can also minimize or even practically eliminate die-off as well.

            Yes for sure, I have the same thing with my clients and have seen this over and over again over the last 10 years, some people will not get well until they deal with the metals when they have too much, properly that is, which unfortunately Functional Medicine does NOT teach. (I have the full modules and have studied some of them)

            Cheers, Jason

          • Jason
            October 31, 2017 at 2:12 pm

            Hi Kendra. So I found several studies showing that Parasites can take on Metal, mostly animal/fish but there is apparently a Human one done in Germany that I have not found yet. Without looking at them really closely it is hard to say if they were “good” and legit studies, but I found enough of them that it seems likely to be legit.

            Do you have/Did you find anything showing a Candida/Fungus/Yeast connection though, where it shows it has them as part of it biofilm etc?

            The Yeast one I really have trouble with, I have killed that #__*#_)*# in myself at least 100 times, I am always BETTER after (same with clients and 1000’s of others on the net), even though I am still highly toxic, why would I be better if it was protecting me? Doesn’t quite add up, but at the same time there are things that point to a strong relationship no doubt about that, I am thinking now that it and Hg are both bound to the same Sulfur proteins and compounds in the body which makes sense since they are both attracted to them. The one thing I have noticed before, is I “might” be more sensitive to thiols when the Candida is near dead (it is never truly dead, that POS!)


          • Jason
            October 31, 2017 at 2:30 pm

            Also I am curious what you are doing for Metals, and how you are gauging your progress if you are with tests? One can not just look at the level of Mercury on the Hair test of course, and it sounds like you went the Dr. Wilson way or spin-off of training for HTMA and Nutritional Balancing, and I don’t think they teach how to properly gauge Mercury status in particular (it is difficult and not an exact science for sure, and there is NO way to detect how much is left in the Brain)

  • Ariana
    December 17, 2017 at 3:47 am

    Hi Kendra,
    I was wondering where people go to get a GI-MAP done? I live in the United States, and I’m not sure doctors here commonly practice that. I’m also curious about the price? Would most insurance cover something like that?

  • Vae
    January 12, 2018 at 5:14 pm

    GI-MAP has been updated now. Using now qPCR technology (vs PCR)

    They have expanded on some more bacterial detection ..such as Citrobacter freundii. and now more quanitive results instead of just Negative/Positive.

    I think now it’s price tag (update has not changed price!) reflects it’s true value more now

  • Sarah
    February 1, 2018 at 5:46 am

    Hi there! Great post. I was just wondering if you’ve managed to clear the Klebsiella now? Thanks!

  • Sarah
    February 27, 2018 at 6:49 am

    That’s fantastic. Well done! Did you add in anything different or just continue with the same protocol?

  • Alina Novak
    March 9, 2018 at 1:25 am

    Hi Kendra,
    What causes low elastase-1 and how to fix it? Mine was 104. It should be over 200.
    If it helps my steatocrit was a little high at 20. It should be under 15
    Thank you in advance!

  • EL
    March 29, 2018 at 3:04 pm

    Can you tell me if vibrio cholera is 1.59e4 and klebsiella pneumoniae is 1.34e3 but not neither one is flagged as high do you recommend to treat it?

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